BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022G05LP1|AL427946
(1056 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig236 1483 0.0
3x_Contig1742 147 5e-35
>3x_Contig236
Length = 1924
Score = 1483 bits (747), Expect = 0.0
Identities = 772/781 (98%)
Strand = Plus / Plus
Query: 1 atcgtatcccttcttatcagcttaatrgcaacattcttagactcatccgaattgctttta 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1144 atcgtatcccttcttatcagcttaatggcaacattcttagactcatccgaattgctttta 1203
Query: 61 gaccaccctagcttgactttcccaaattcaccttctcctaaagtcggaccgatgatgtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 gaccaccctagcttgactttcccaaattcaccttctcctaaagtcggaccgatgatgtaa 1263
Query: 121 ggaccaaacgttacctgccgtcttcgaccgttatgcgaagagctatgtcgacggctgcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1264 ggaccaaacgttacctgccgtcttcgaccgttatgcgaagagctatgtcgacggctgcta 1323
Query: 181 ccattggaacagttatgagcatgactcgtatgaatatgatgagaggactccgtgttggtg 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1324 ccattggaacagttatgagcatgactcgtatgaatatcatgagaggactccgtgttggtg 1383
Query: 241 gtgggtccaccgtaataggtgtgacgatgcgcttctgtagacattatttttagcacctag 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1384 gtgggtccaccgtaataggtgtgacgatgcgcttctgtagacattattttcagcacctag 1443
Query: 301 gggagaaccaaaataaaataactgggataagtaatgacacgcgtattaaaaattcaaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1444 gggagaaccaaaataaaataactgggataagtaatgacacgcgtattaaaaattcaaaac 1503
Query: 361 tcaatcagtatggaattatattaattgagctcttagtgacgttattcagttccctacttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1504 tcaatcagtatggaattatattaattgagctcttagtgacgttattcagttccctacttg 1563
Query: 421 tggcaccagacgttcctgagatttggttttacaaacttgaagagtattccctcgaagaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 tggcaccagacgttcctgagatttggttttacaaacttgaagagtattccctcgaagaac 1623
Query: 481 taaaaaaaaaaagactcttgaaattcgaaatttcctggaatctaactgcacagtccctct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1624 taaaaaaaaaaagactcttgaaattcgaaatttcctggaatctaactgcacagtccctct 1683
Query: 541 ccgccaatggtacccaatttaatcagatgttcaagctagaagcctacaacagtgcaggat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1684 ccgccaatggtacccaatttaatcagatgttcaagctagaagcctacaacagtgcaggat 1743
Query: 601 ctttagacgtttgattataagtccatatataaacaaactatttcttttgatttcaattgt 660
||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1744 cttcagacgtttgattatcagtccatatataaccaaactatttcttttgatttcaattgt 1803
Query: 661 ttttataaaaattcctttaagctttaaacaaaaaacctaattaagaaatacgcgaacttg 720
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1804 ttttataaaacttcctttaagctttaaacaaaaaacctaattaagaaatacgcgaacttg 1863
Query: 721 gaacggtaggattccaaagaggacgcaatatatcaactgccacatattgttcgaactcat 780
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 1864 gaacggtaggattccaaagaggacgcaatatatcacctgcaacatattgttcgaactcat 1923
Query: 781 c 781
|
Sbjct: 1924 c 1924
>3x_Contig1742
Length = 17167
Score = 147 bits (74), Expect = 5e-35
Identities = 75/76 (98%)
Strand = Plus / Minus
Query: 981 ggagtggctgatggaagattgagttcagagtatactaaagatgtagagcctgcaggggtt 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17167 ggagtggctgatggaagattgagttcagagtatactaaagatgtagagcctgcaggggtt 17108
Query: 1041 ggatgttcttwcttat 1056
|||||||||| |||||
Sbjct: 17107 ggatgttcttacttat 17092
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,808
Number of Sequences: 1807
Number of extensions: 12808
Number of successful extensions: 81
Number of sequences better than 1.0e-20: 2
length of query: 1056
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1040
effective length of database: 10,329,639
effective search space: 10742824560
effective search space used: 10742824560
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)